Published Datasets

Datasets from published Spatial Transcriptomics papers can be found bellow following the links:

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
DOI: 10.1126/science.aaf2403

Massive and parallel expression profiling using microarrayed single-cell sequencing
DOI: 10.1038/ncomms13182

Spatially resolved transcriptome profiling in model plant species
DOI: 10.1038/nplants.2017.61

Spatial detection of fetal marker genes expressed at low level in adult human heart tissue
DOI: 10.1038/s41598-017-13462-5

ST Spot Detector: a web-based application for automatic spot and tissue detection for Spatial Transcriptomics image data sets
DOI: 10.1093/bioinformatics/bty030

Spatial maps of prostate cancer transcriptomes reveal an unexplored landscape of heterogeneity
DOI: 10.1038/s41467-018-04724-5

Spatially resolved transcriptomics enables dissection of genetic heterogeneity in stage III cutaneous malignant melanoma
DOI: 10.1158/0008-5472.CAN-18-0747

Exploring inflammatory signatures in arthritic joint biopsies with Spatial Transcriptomics
DOI: 10.1038/s41598-019-55441-y

A spatiotemporal organ-wide gene expression and cell atlas of the developing human heart
DOI: 10.1016/j.cell.2019.11.025